BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009D07LP1|AL426026
(820 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1339 1607 0.0
>3x_Contig1339
Length = 6194
Score = 1607 bits (810), Expect = 0.0
Identities = 818/820 (99%), Gaps = 1/820 (0%)
Strand = Plus / Plus
Query: 2 caaaatgacaataaactaaaaaataaaaaaataaaaaaaataatagaaaatgagtcaatc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 caaaatgacaataaactaaaaaataaaaaaataaaaaaaataatagaaaatgagtcaatc 492
Query: 62 agggctcgaatggagaattttcaaatttgggaatatctttttcttcgaagtttccaagcc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 agggctcgaatggagaattttcaaatttgggaatatctttttcttcgaagtttccaagcc 552
Query: 122 ggtgtttgcacagtttttcattacgg-tcatctttgaagcttgctcttgctaaataagac 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 553 ggtgtttgcacagtttttcattacgggtcatctttgaagcttgctcttgctaaataagac 612
Query: 181 gtggctcatcgttaggataaattgaaatcacaatatcattgcatcaaacacagaccaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gtggctcatcgttaggataaattgaaatcacaatatcattgcatcaaacacagaccaagg 672
Query: 241 attctctacagatatctgtctgtttgtgccggtgaagagataattacaaggtcaaaatgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 attctctacagatatctgtctgtttgtgccggtgaagagataattacaaggtcaaaatgt 732
Query: 301 gggaggrattcgacatcacaaagttaccatactatgatccaaaggtcgacaataaagtag 360
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 gggaggaattcgacatcacaaagttaccatactatgatccaaaggtcgacaataaagtag 792
Query: 361 ccttagtaacaggtgggaattcaggaataggatactatactgtgttgcatttatatctac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 ccttagtaacaggtgggaattcaggaataggatactatactgtgttgcatttatatctac 852
Query: 421 atggattcaaagtatacctaggtggcagaaatagcagtcgagtgaaccatgccattaaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 atggattcaaagtatacctaggtggcagaaatagcagtcgagtgaaccatgccattaaag 912
Query: 481 aaatcaagaaagaagcagaaatacgtcttcggaagggacaagatgagaagcctcatgatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913 aaatcaagaaagaagcagaaatacgtcttcggaagggacaagatgagaagcctcatgatg 972
Query: 541 gtttaatgattagaaaaaccggaaaacttgaatatcttcatattgatttaacagatttga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 973 gtttaatgattagaaaaaccggaaaacttgaatatcttcatattgatttaacagatttga 1032
Query: 601 actcggtggagaaagccgctactaagttcactgtacaagaagaccatttggatgttttga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1033 actcggtggagaaagccgctactaagttcactgtacaagaagaccatttggatgttttga 1092
Query: 661 taaacaatgcaggagtgatggctataccatacgagttaacaaaggacaactttgagatac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1093 taaacaatgcaggagtgatggctataccatacgagttaacaaaggacaactttgagatac 1152
Query: 721 agatgcaaaccaactacgtctcacattttctactcacaatgagattgttacccttaatca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1153 agatgcaaaccaactacgtctcacattttctactcacaatgagattgttacccttaatca 1212
Query: 781 aagccagaaagggtagagtgataactgtgtcatctttagg 820
||||||||||||||||||||||||||||||||||||||||
Sbjct: 1213 aagccagaaagggtagagtgataactgtgtcatctttagg 1252
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8463
Number of Sequences: 1807
Number of extensions: 8463
Number of successful extensions: 265
Number of sequences better than 1.0e-20: 1
length of query: 820
length of database: 10,358,551
effective HSP length: 16
effective length of query: 804
effective length of database: 10,329,639
effective search space: 8305029756
effective search space used: 8305029756
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)